Show method for TCRrep objects

Prints a compact summary of a TCRrep object, including the number of clonotypes, organism, chain combination, distance metric, distance computation status, and k-nearest-neighbour status when available.

Usage

# S4 method for class 'TCRrep'
show(object)

Arguments

object

A TCRrep object.

Value

Returns invisible(object).

Examples

# \donttest{
tcrs <- data.frame(
    va    = c("TRAV1-1*01", "TRAV1-1*01"),
    cdr3a = c("CAVRDSSYKLIF", "CAVRDSSYKLIF"),
    vb    = c("TRBV19*01", "TRBV19*01"),
    cdr3b = c("CASSIRSSYEQYF", "CASSIRSYEQYF"),
    stringsAsFactors = FALSE
)
obj <- TCRrep(tcrs, organism = "human")
show(obj)
#> TCRrep object: 2 clonotypes
#>   organism: human
#>   chains: AB
#>   metric: tcrdist
#>   distances: not computed
# }